BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017C12LP1|AL427144
(962 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1280 0.0
3x_Contig577 731 0.0
3x_Contig1790 375 e-104
3x_Contig1701 316 7e-86
3x_Contig1803 155 2e-37
3x_Contig1806 133 6e-31
3x_Contig1585 127 4e-29
3x_Contig1560 127 4e-29
3x_Contig1796 119 1e-26
3x_Contig1723 117 4e-26
3x_Contig1802 105 1e-22
>3x_Contig1805
Length = 19369
Score = 1280 bits (645), Expect = 0.0
Identities = 647/649 (99%)
Strand = Plus / Plus
Query: 314 tagaaaggcccgcacactgctgtggaacaacatacttttcagattgggcttccaatcacc 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tagaaaggcccgcacactgctgtggaacaacatacttttcagattgggcttccaatcacc 72
Query: 374 aaaagctgtagccttgatcctagttcgtctcagcttcagattcttatctagcattggttc 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aaaagctgtagccttgatcctagttcgtctcagcttcagattcttatctagcattggttc 132
Query: 434 aataactggcgccttagaagtgctcctacaacgccagggaacaacaaacggatagtaaat 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aataactggcgccttagaagtgctcctacaacgccagggaacaacaaacggatagtaaat 192
Query: 494 aggcaattgatgtcaaatacagataatatgagagtatagggaaacccatctgttcagggt 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aggcaattgatgtcaaatacagataatatgagagtatagggaaacccatctgttcagggt 252
Query: 554 aacactggccgtagattcggggtctcggcacatcacggtgtgcttgtcggaatagattgg 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aacactggccgtagattcggggtctcggcacatcacggtgtgcttgtcggaatagattgg 312
Query: 614 ggaagagaaaaaaatcaaagtgtacgtttaagatccaaaaattgtggtgagatatctgct 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggaagagaaaaaaatcaaagtgtacgtttaagatccaaaaattgtggtgagatatctgct 372
Query: 674 ttttagtatgggggtggtcaatatggaagaataaatgtctgacccgtacatatctgtgtg 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttttagtatgggggtggtcaatatggaagaataaatgtctgacccgtacatatctgtgtg 432
Query: 734 tggatcatacgggaacggtatcgtatgtkaataattagggtcctgctcccttttatgccg 793
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 433 tggatcatacgggaacggtatcgtatgtgaataattagggtcctgctcccttttatgccg 492
Query: 794 agatttaacaataggcagtggtaaagatccccattagtcctccaagagacaaattaatag 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agatttaacaataggcagtggtaaagatccccattagtcctccaagagacaaattaatag 552
Query: 854 gacccttacttagatctcatgattttctacatggtttacatatataaagatattatgaga 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gacccttacttagatctcatgattttctacatggtttacatatataaagatattatgaga 612
Query: 914 ggaagattatgtcggtgaatcagtaggattctaatttggkttagtatga 962
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 613 ggaagattatgtcggtgaatcagtaggattctaatttggtttagtatga 661
>3x_Contig577
Length = 1642
Score = 731 bits (368), Expect = 0.0
Identities = 406/419 (96%), Gaps = 2/419 (0%)
Strand = Plus / Minus
Query: 541 atctgttcagggtaacactggccgtagattcggggtctcggcacatcacggtgtgcttgt 600
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1630 atctgttcaggg--acactggccgtagattcggggtctcggcacatcacggtgtgcttgt 1573
Query: 601 cggaatagattggggaagagaaaaaaatcaaagtgtacgtttaagatccaaaaattgtgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1572 cggaatagattggggaagagaaaaaaatcaaagtgtacgtttaagatccaaaaattgtgg 1513
Query: 661 tgagatatctgctttttagtatgggggtggtcaatatggaagaataaatgtctgacccgt 720
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1512 tgagatatctgctttttagtatgggggtggtcaatatggaagaataaacgtctgacccgt 1453
Query: 721 acatatctgtgtgtggatcatacgggaacggtatcgtatgtkaataattagggtcctgct 780
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 1452 acatatctgtgtgtggatcatacgggaacggtatcgtatgtgaataattagggtcctact 1393
Query: 781 cccttttatgccgagatttaacaataggcagtggtaaagatccccattagtcctccaaga 840
||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 1392 cccttttatgccgagatttaaaaatagacagcggtaaagatccccattagtcctccaaga 1333
Query: 841 gacaaattaataggacccttacttagatctcatgattttctacatggtttacatatataa 900
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1332 gacaaattaataggacccttacttggatctcatgattttctacatggtttacatatataa 1273
Query: 901 agatattatgagaggaagattatgtcggtgaatcagtaggattctaatttggkttagta 959
|||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1272 agatattatgagaggaagtttatgtcggcgaatcagtaggattttaatttggtttagta 1214
>3x_Contig1790
Length = 27369
Score = 375 bits (189), Expect = e-104
Identities = 233/248 (93%), Gaps = 6/248 (2%)
Strand = Plus / Minus
Query: 98 agatgttctccttggtttcttctatgtgacctatataatattgtagaacagtaatagata 157
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7237 agatgttctccttggtttcttctatctgacctatataatattgtagaacagtaatagatg 7178
Query: 158 ggttgtcaagttcgaataggaaattgaatgaagaaacagtctacatatatactttttgat 217
||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 7177 ggttgtcaagttcgaatgggaaattgaatgaagaaaccgtctacttatatactttttgat 7118
Query: 218 ttgatgttcaaatgttgggtgctgtagctgtagccttgatcttagttatagcggcttcag 277
||||||||||| | |||||| | ||||||||||||||||||||||||||||||||
Sbjct: 7117 ttgatgttcaactattgggt------gttgtagccttgatcttagttatagcggcttcag 7064
Query: 278 ccctgctttccgtattattccaataaagtggcggcttagaaaggcccgcacactgctgtg 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 7063 ccctgctttccgtattattccaataaagtggcggcttagaaaggcccgcacactgctatg 7004
Query: 338 gaacaaca 345
||||||||
Sbjct: 7003 gaacaaca 6996
Score = 125 bits (63), Expect = 2e-28
Identities = 95/103 (92%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 1 atcgactagttaagtaaattacttacggtgttccccttggtttcttgcatctgacatata 60
|||||||| ||||||||||||||||||||| || ||||| |||||| ||||||||||| |
Sbjct: 5182 atcgactaattaagtaaattacttacggtgctctccttg-tttcttacatctgacataca 5124
Query: 61 agttaat-tagaacaataattaatatgtcgtcaaatccagatg 102
||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 5123 agttaatgtagaacaataattaatatgtcatcaaatccagatg 5081
>3x_Contig1701
Length = 10926
Score = 316 bits (159), Expect = 7e-86
Identities = 227/250 (90%), Gaps = 6/250 (2%)
Strand = Plus / Plus
Query: 98 agatgttctccttggtttcttctatgtgacctatataatattgtagaacagtaatagata 157
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 5621 agatgttctccttggtttcttctatgtgacctatataatgttgtagaacagtaataggta 5680
Query: 158 ggttgtcaagttcgaataggaaattgaatgaagaaacagtctacatatatactttttgat 217
||||||||| || |||| |||||||||| |||||||| || || |||||||||||||||
Sbjct: 5681 ggttgtcaaattggaatgggaaattgaacgaagaaaccatccacttatatactttttgat 5740
Query: 218 ttgatgttcaaatgttgggtgctgtagctgtagccttgatcttagttatagcggcttcag 277
||||||||||| | |||||| | ||||||||||||||||||||||||||||||||
Sbjct: 5741 ttgatgttcaactattgggt------gttgtagccttgatcttagttatagcggcttcag 5794
Query: 278 ccctgctttccgtattattccaataaagtggcggcttagaaaggcccgcacactgctgtg 337
||||| | |||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 5795 ccctggtgtccgtattattccaataaagtggcggcttagacaagcccgcacactgctgtg 5854
Query: 338 gaacaacata 347
||||||||||
Sbjct: 5855 gaacaacata 5864
Score = 163 bits (82), Expect = 7e-40
Identities = 97/102 (95%)
Strand = Plus / Plus
Query: 378 gctgtagccttgatcctagttcgtctcagcttcagattcttatctagcattggttcaata 437
||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||
Sbjct: 5280 gctgtagccttgatcctagttcgtctcagcttcagcttcttatttagcattgtttcaata 5339
Query: 438 actggcgccttagaagtgctcctacaacgccagggaacaaca 479
||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 5340 actggcgccttagaactgctcctacaacgccaggtaacaaca 5381
>3x_Contig1803
Length = 52241
Score = 155 bits (78), Expect = 2e-37
Identities = 90/94 (95%)
Strand = Plus / Plus
Query: 386 cttgatcctagttcgtctcagcttcagattcttatctagcattggttcaataactggcgc 445
|||||||||||||| || ||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 51513 cttgatcctagttcatcccagcttcagcttcttatttagcattggttcaataactggcgc 51572
Query: 446 cttagaagtgctcctacaacgccagggaacaaca 479
||||||||||||||||||||||||||||||||||
Sbjct: 51573 cttagaagtgctcctacaacgccagggaacaaca 51606
>3x_Contig1806
Length = 53694
Score = 133 bits (67), Expect = 6e-31
Identities = 118/135 (87%)
Strand = Plus / Plus
Query: 345 atacttttcagattgggcttccaatcaccaaaagctgtagccttgatcctagttcgtctc 404
|||||||| |||||| |||| | ||| |||| |||||||||| |||| ||||| |||
Sbjct: 41570 atactttttggattggtcttcgattcatcaaacgctgtagcctcgatcatagttgcactc 41629
Query: 405 agcttcagattcttatctagcattggttcaataactggcgccttagaagtgctcctacaa 464
| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 41630 aacttcaacttcttatctagcattggttcaataactggcgccttagaaatgctcctacaa 41689
Query: 465 cgccagggaacaaca 479
|||||| ||||||||
Sbjct: 41690 cgccagagaacaaca 41704
Score = 125 bits (63), Expect = 2e-28
Identities = 85/91 (93%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 2 tcgactagttaagtaaattacttacggtgttccccttggtttcttgcatctgacatataa 61
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 53486 tcgactagttaagtaaattacttacggtattccccttggtttcttctatctgacatataa 53545
Query: 62 gttaa-ttagaacaataattaatatgtcgtc 91
||||| ||||| ||||||||||||||||||
Sbjct: 53546 gttaacgtagaataataattaatatgtcgtc 53576
Score = 121 bits (61), Expect = 2e-27
Identities = 83/89 (93%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 2 tcgactagttaagtaaattacttacggtgttccccttggtttcttgcatctgacatataa 61
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 41440 tcgactagttaagtaaattacttacggtgttctccttggtttcttacatctgacatataa 41499
Query: 62 gttaat-tagaacaataattaatatgtcg 89
| ||| ||||||||||| ||||||||||
Sbjct: 41500 gccaatgtagaacaataactaatatgtcg 41528
>3x_Contig1585
Length = 11490
Score = 127 bits (64), Expect = 4e-29
Identities = 97/108 (89%)
Strand = Plus / Minus
Query: 345 atacttttcagattgggcttccaatcaccaaaagctgtagccttgatcctagttcgtctc 404
|||||||| ||||||| |||||| ||||||| ||||||||||||||||||||| ||||
Sbjct: 1510 atactttttagattggttttccaagcaccaaactctgtagccttgatcctagttcctctc 1451
Query: 405 agcttcagattcttatctagcattggttcaataactggcgccttagaa 452
|||||| | ||||||| |||||||||||| ||||||||||||||||||
Sbjct: 1450 agcttcggcttcttatttagcattggttcgataactggcgccttagaa 1403
>3x_Contig1560
Length = 9209
Score = 127 bits (64), Expect = 4e-29
Identities = 92/100 (92%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 2 tcgactagttaagtaaattacttacggtgttccccttggtttcttgcatctgacatataa 61
||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 2215 tcgactaattaagtaaattacttacggtgttctccttggtttcttacatctgacatataa 2274
Query: 62 gttaat-tagaacaataattaatatgtcgtcaaatccaga 100
||||| |||||||| |||| ||||||||||||||||||
Sbjct: 2275 cttaatgtagaacaaatattagtatgtcgtcaaatccaga 2314
>3x_Contig1796
Length = 24558
Score = 119 bits (60), Expect = 1e-26
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 401 tctcagcttcagattcttatctagcattggttcaataactggcgccttagaagtgctcct 460
|||||||||||| ||||||| ||||||| ||||||||| ||||||||||||| |||||||
Sbjct: 8718 tctcagcttcagcttcttatttagcattagttcaataattggcgccttagaaatgctcct 8777
Query: 461 acaacgccagggaacaacaa 480
||||||||||||||||||||
Sbjct: 8778 acaacgccagggaacaacaa 8797
>3x_Contig1723
Length = 15177
Score = 117 bits (59), Expect = 4e-26
Identities = 116/135 (85%)
Strand = Plus / Plus
Query: 345 atacttttcagattgggcttccaatcaccaaaagctgtagccttgatcctagttcgtctc 404
||||||| |||||||| || |||||||||||| |||||||||||||||||||| | ||
Sbjct: 6569 atactttgcagattggtctcccaatcaccaaacgctgtagccttgatcctagtgtctttc 6628
Query: 405 agcttcagattcttatctagcattggttcaataactggcgccttagaagtgctcctacaa 464
|||||||| ||||||| || || ||||||||||| || |||||||||| ||| | |||||
Sbjct: 6629 agcttcagtttcttatttaacaatggttcaataaatgacgccttagaaatgcccgtacaa 6688
Query: 465 cgccagggaacaaca 479
|||| |||||||||
Sbjct: 6689 tgccatggaacaaca 6703
>3x_Contig1802
Length = 45229
Score = 105 bits (53), Expect = 1e-22
Identities = 84/93 (90%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 2 tcgactagttaagtaaattacttacggtgttccccttggtttcttgcatctgacatataa 61
||||||| |||||| |||| |||||||||||| ||| |||||||| ||| ||||||||||
Sbjct: 36035 tcgactaattaagttaatttcttacggtgttctcctcggtttcttacatatgacatataa 36094
Query: 62 gttaat-tagaacaataattaatatgtcgtcaa 93
|||||| |||||||||||||||||||||||||
Sbjct: 36095 gttaatgcagaacaataattaatatgtcgtcaa 36127
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6620
Number of Sequences: 1807
Number of extensions: 6620
Number of successful extensions: 120
Number of sequences better than 1.0e-20: 11
length of query: 962
length of database: 10,358,551
effective HSP length: 16
effective length of query: 946
effective length of database: 10,329,639
effective search space: 9771838494
effective search space used: 9771838494
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)